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pip install primavera Copy PIP instructions.
Github Page.
The returned selected_primers contains a list of lists of primers (one list for each construct). The PDF report returned looks like this:
Maintainers.
Infos.
Project description.
primavera 0.1.8.
Live demo.
Web documentation:
License: see LICENSE.txt.
Project links.
The following code assumes that a file available_primers.fa contains the labels and sequences of all available primers in the lab, and that the assemblies to be sequence-verified have annotations indicating the zones that the sequencing should cover and zones where primer annealing should be avoided.
Primer selection + data analysis for DNA assembly validation.
Primavera is part of the EGF Codons synthetic biology software suite for DNA design, manufacturing and validation.
PIP installation:
Statistics.
Primavera is a Python library to plan and analyze primer-based verification of DNA assemblies, using Sanger sequencing or verification PCR. It implements methods to design and select primers to ensure that the relevant assembly segments will be covered, and can generate simple (but approximative) plots summarizing the results of a batch of Sanger sequencing.
Author: Zulko.
Last released: May 15, 2019.
More biology software.
Navigation.
Tags DNA, assembly, sequencing, primer, design.
View statistics for this project via Libraries.io, or by using our public dataset on Google BigQuery.
Primer selection example.

License: MIT, Copyright Edinburgh Genome Foundry.
http://takutugu1980.eklablog.com/download-freebsd-x64-a177954088